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Publications

Selected Recent Publications


Rinn JL
, Kertesz M, Wang JK, Squazzo SL, Xu X, Brugmann SA, Goodnough LH, Helms JA, Farnham PJ, Segal E, Chang HY.  Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs.Cell. 2007 Jun 29;129(7):1311-23.

O'Geen H, Squazzo SL, Iyengar S, Blahnik K, Rinn JL, Chang HY, Green R,Farnham PJ. Genome-wide analysis of KAP1 binding suggests autoregulation of KRAB-ZNFs. PLoS Genet. 2007 Jun;3(6):e89. Epub 2007 Apr 19.

Rinn JL, Bondre C, Gladstone HB, Brown PO, Chang HY.  Anatomic demarcation by positional variation in fibroblast gene expressionprograms. PLoS Genet. 2006 Jul;2(7):e119.

Rinn JL, Snyder M.  Sexual dimorphism in mammalian gene expression.Trends Genet. 2005 May;21(5):298-305. Review.

Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, Zhu X, Rinn JL, Tongprasit W, Samanta M, Weissman S, Gerstein M, Snyder M. Global identification of human transcribed sequences with genome tiling arrays.Science. 2004 Dec 24;306(5705):2242-6. Epub 2004 Nov 11.

Rinn JL, Rozowsky JS, Laurenzi IJ, Petersen PH, Zou K, Zhong W, Gerstein M,Snyder M. Major molecular differences between mammalian sexes are involved in drug metabolism and renal function. Dev Cell. 2004 Jun;6(6):791-800.

Rinn JL, Euskirchen G, Bertone P, Martone R, Luscombe NM, Hartman S, Harrison PM, Nelson FK, Miller P, Gerstein M, Weissman S, Snyder M. The transcriptional activity of human Chromosome 22. Genes Dev. 2003 Feb 15;17(4):529-40.